Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 31 | BSEG_03267 | Q9F234 | Positive | 1203158 - 1205542 | 91745.5 |
| hypothetical protein | BSEG_03266 | Not Available | Positive | 1205560 - 1207560 | 74785.2 |
| cupin domain protein | BSEG_03265 | Q05527 | Negative | 1207651 - 1208142 | 18182.9 |
| putative pectate lyase | BSEG_03264 | Not Available | Positive | 1208331 - 1209944 | 61334.2 |
| hypothetical protein | BSEG_03263 | Not Available | Positive | 1209966 - 1211126 | 43504.6 |
| gdsl-like protein | BSEG_03262 | Not Available | Positive | 1211133 - 1212860 | 64061.8 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_03261 | Not Available | Positive | 1213056 - 1217456 | 169028.0 |
| hypothetical protein | BSEG_03260 | Not Available | Positive | 1217653 - 1218387 | 27028.4 |
| peptidase, s9a/b/c family, catalytic domain protein | BSEG_03259 | B2RJX3 | Positive | 1218499 - 1220940 | 94355.2 |
| mucin-desulfating sulfatase | BSEG_03258 | E8MF12 | Negative | 1221019 - 1222101 | 41579.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

