Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase, family 43 | BSEG_03277 | A7LXU0 | Positive | 1182499 - 1183998 | 56564.9 |
| hypothetical protein | BSEG_03276 | Not Available | Positive | 1184036 - 1185643 | 61917.4 |
| hypothetical protein | BSEG_03275 | Not Available | Positive | 1185836 - 1188382 | 94959.8 |
| pectinesterase | BSEG_03274 | Not Available | Positive | 1188445 - 1189965 | 55708.4 |
| rna polymerase sigma-70 factor | BSEG_03273 | Not Available | Positive | 1190030 - 1190593 | 22502.1 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_03272 | Not Available | Positive | 1190664 - 1191596 | 35856.4 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03271 | Not Available | Positive | 1191652 - 1194951 | 122167.0 |
| susd family protein | BSEG_03270 | Not Available | Positive | 1194970 - 1196658 | 64201.7 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_03269 | Q03WL0 | Positive | 1196744 - 1199779 | 114689.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_03268 | Not Available | Positive | 1199776 - 1203144 | 126799.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

