Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_03299 | Not Available | Positive | 1145782 - 1146786 | 38087.6 |
| hypothetical protein | BSEG_03298 | Not Available | Positive | 1146855 - 1148318 | 55529.9 |
| hypothetical protein | BSEG_03297 | Not Available | Positive | 1148414 - 1149154 | 28074.7 |
| hypothetical protein | BSEG_03296 | E1BMP7 | Positive | 1149176 - 1152502 | 128673.0 |
| transporter, major facilitator family protein | BSEG_03295 | P42237 | Negative | 1152555 - 1154030 | 54264.1 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | BSEG_03294 | Q8A0B5 | Negative | 1154248 - 1155204 | 35996.2 |
| pts system galactitol-specific iic component | BSEG_03293 | P39365 | Negative | 1155223 - 1156614 | 49960.0 |
| glycosyl hydrolase, family 88 | BSEG_03292 | Not Available | Positive | 1156904 - 1158133 | 47092.3 |
| pectinesterase | BSEG_03291 | Q9LVQ0 | Positive | 1158148 - 1159098 | 35858.5 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03290 | Not Available | Positive | 1159317 - 1162589 | 118856.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

