Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_01655 | Not Available | Positive | 118741 - 120981 | 84367.9 |
| hypothetical protein | BSEG_01654 | Not Available | Positive | 121038 - 123155 | 81145.0 |
| hypothetical protein | BSEG_01653 | Not Available | Positive | 123429 - 125780 | 89698.4 |
| polygalacturonase (pectinase) | BSEG_01652 | Not Available | Positive | 125844 - 127232 | 52070.7 |
| fg-gap repeat protein | BSEG_01651 | Not Available | Positive | 127229 - 129136 | 70614.4 |
| glycosyl hydrolase, family 88 | BSEG_01650 | O31521 | Positive | 129149 - 130564 | 53246.8 |
| l-rhamnose 1-epimerase | BSEG_01649 | A6KWR4 | Positive | 130601 - 130915 | 12228.6 |
| response regulator receiver domain protein | BSEG_01648 | Not Available | Positive | 130985 - 135283 | 163277.0 |
| hypothetical protein | BSEG_01647 | Not Available | Negative | 135371 - 135589 | 7895.11 |
| ribosomal protein l19 | BSEG_01646 | A6KWR2 | Negative | 135743 - 136096 | 13130.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

