Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_03319 | Not Available | Positive | 1101377 - 1103446 | 78999.5 |
| hypothetical protein | BSEG_03318 | P70665 | Positive | 1103522 - 1104940 | 52946.9 |
| alpha-galactosidase | BSEG_03317 | Not Available | Positive | 1105317 - 1106933 | 60978.4 |
| hypothetical protein | BSEG_03316 | Not Available | Positive | 1106939 - 1107811 | 32978.9 |
| bacterial alpha-l-rhamnosidase | BSEG_03315 | Not Available | Positive | 1107821 - 1109593 | 66286.6 |
| transcriptional regulator, arac family | BSEG_03314 | Not Available | Positive | 1109724 - 1112510 | 106280.0 |
| glycosyl hydrolase, family 43 | BSEG_03313 | Not Available | Positive | 1112656 - 1114290 | 61529.8 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_03312 | T2KN75 | Positive | 1114402 - 1117380 | 113570.0 |
| glycosyl hydrolase, family 88 | BSEG_03311 | Not Available | Positive | 1117436 - 1118626 | 45494.8 |
| hypothetical protein | BSEG_03310 | Not Available | Positive | 1118616 - 1119845 | 46699.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

