Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polygalacturonase (pectinase) | BSEG_03340 | Not Available | Negative | 1065550 - 1068309 | 102697.0 |
| hypothetical protein | BSEG_03339 | Not Available | Positive | 1068520 - 1069215 | 26789.0 |
| arylsulfatase | BSEG_03338 | T2KM04 | Negative | 1069419 - 1070852 | 54807.4 |
| susd family protein | BSEG_03337 | Not Available | Negative | 1070857 - 1072659 | 69749.6 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03336 | Not Available | Negative | 1072674 - 1076081 | 127333.0 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_03335 | Not Available | Negative | 1076251 - 1077225 | 37090.5 |
| rna polymerase sigma-70 factor | BSEG_03334 | Not Available | Negative | 1077281 - 1077862 | 23412.5 |
| glycosyl hydrolase, family 43 | BSEG_03333 | P45982 | Negative | 1078029 - 1079678 | 61783.2 |
| hypothetical protein | BSEG_03332 | Not Available | Negative | 1079794 - 1081116 | 49806.6 |
| susd family protein | BSEG_03330 | Not Available | Negative | 1082959 - 1084584 | 61259.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

