Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nadh dehydrogenase subunit a | BSEG_03350 | A6L171 | Negative | 1051236 - 1051586 | 13099.5 |
| hypothetical protein | BSEG_03349 | Not Available | Negative | 1051690 - 1052067 | 14727.8 |
| potassium uptake protein, trkh family | BSEG_03348 | E1V6C5 | Negative | 1052171 - 1053625 | 53574.4 |
| potassium transporter peripheral membrane component | BSEG_03347 | P71354 | Negative | 1053625 - 1054965 | 49250.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | BSEG_03346 | A6L175 | Negative | 1054978 - 1056912 | 71792.0 |
| gscfa family protein | BSEG_03345 | Not Available | Positive | 1056969 - 1057955 | 38458.3 |
| alanine racemase | BSEG_03344 | Q97LR2 | Positive | 1057931 - 1060396 | 92704.8 |
| hypothetical protein | BSEG_03343 | Not Available | Positive | 1060486 - 1061049 | 21513.1 |
| polygalacturonase (pectinase) | BSEG_03342 | Q949Z1 | Negative | 1061201 - 1062505 | 49169.9 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_03341 | Not Available | Negative | 1062540 - 1065452 | 109920.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

