Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobw/p47k family protein | BSEG_03371 | P94400 | Positive | 1023002 - 1024225 | 46659.1 |
| glycosyl hydrolase, family 43 | BSEG_03370 | Not Available | Negative | 1024297 - 1027164 | 108200.0 |
| susd family protein | BSEG_03369 | Not Available | Negative | 1027181 - 1028899 | 64244.0 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03368 | Not Available | Negative | 1028912 - 1032160 | 120417.0 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_03367 | Not Available | Positive | 1032203 - 1036702 | 172474.0 |
| polygalacturonase (pectinase) | BSEG_03366 | P27644 | Negative | 1036780 - 1038186 | 52469.7 |
| hypothetical protein | BSEG_03365 | Not Available | Positive | 1038387 - 1039064 | 26162.3 |
| hypothetical protein | BSEG_03363 | Not Available | Positive | 1039274 - 1039675 | 16107.5 |
| histidine kinase a domain protein | BSEG_03362 | Not Available | Positive | 1039660 - 1039893 | 8356.16 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_03361 | O06979 | Positive | 1039914 - 1040318 | 15223.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

