Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_04586 | Not Available | Positive | 997481 - 997651 | 6110.36 |
| hypothetical protein | BSEG_04587 | Not Available | Negative | 999281 - 999667 | 15529.8 |
| hypothetical protein | BSEG_00920 | Not Available | Negative | 1002111 - 1002566 | 17680.3 |
| putative low specificity l-threonine aldolase | BSEG_03385 | O50584 | Negative | 1003235 - 1004251 | 37839.5 |
| tonb-dependent receptor | BSEG_03384 | Not Available | Positive | 1004417 - 1007182 | 104494.0 |
| hypothetical protein | BSEG_03383 | Not Available | Positive | 1007219 - 1008796 | 56725.7 |
| putative mannose-6-phosphate isomerase, class i | BSEG_03382 | O31646 | Positive | 1008912 - 1009883 | 36202.5 |
| hypothetical protein | BSEG_03381 | T2KMF9 | Negative | 1009974 - 1011113 | 41676.6 |
| Tmrna,resume consensus sequence (at 89): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 1011281 - 1011675 | Not Available |
| Tmrna,resume consensus sequence (at 393): tttatctggcaacgaaaa | Not Available | Not Available | Positive | 1011584 - 1012103 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

