Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 100115 - 103001 | Not Available |
| fg-gap repeat protein | BSEG_01663 | O31526 | Positive | 101708 - 103534 | 66781.5 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 103082 - 103191 | Not Available |
| gdsl-like protein | BSEG_01662 | Q5BAA2 | Positive | 103682 - 105325 | 60971.2 |
| hypothetical protein | BSEG_01661 | Not Available | Positive | 105347 - 108643 | 124923.0 |
| rna polymerase sigma-70 factor | BSEG_01660 | Not Available | Negative | 109841 - 110422 | 23103.8 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_01659 | Not Available | Positive | 110559 - 111578 | 39104.9 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01658 | Not Available | Positive | 111696 - 115235 | 130863.0 |
| susd family protein | BSEG_01657 | Not Available | Positive | 115254 - 117131 | 70190.4 |
| putative pectate lyase | BSEG_01656 | Not Available | Positive | 117224 - 118732 | 57108.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

