Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_00959 | Not Available | Positive | 965835 - 966701 | 33057.9 |
| mate efflux family protein | BSEG_00958 | Q65SY9 | Positive | 966721 - 968154 | 51497.7 |
| putative hemolysin | BSEG_00957 | Q08432 | Positive | 968158 - 969327 | 44462.1 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BSEG_00956 | E0D7H5 | Positive | 969380 - 970207 | 29475.9 |
| transcriptional regulator, arac family | BSEG_00955 | Not Available | Positive | 970354 - 971166 | 31538.8 |
| carboxymuconolactone decarboxylase family protein | BSEG_04582 | Not Available | Positive | 971297 - 971794 | 18091.8 |
| cupin domain protein | BSEG_00954 | Not Available | Positive | 971810 - 972130 | 11555.5 |
| flavodoxin | BSEG_00953 | Not Available | Positive | 972132 - 972698 | 20875.9 |
| hypothetical protein | BSEG_00952 | Not Available | Positive | 972703 - 973053 | 13921.5 |
| putative 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase | BSEG_00951 | D4YYG1 | Positive | 973050 - 973802 | 26820.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

