Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | BSEG_00978 | Not Available | Negative | 950709 - 950984 | 10402.5 |
| glycosyltransferase, group 2 family protein | BSEG_00977 | Not Available | Negative | 951033 - 952190 | 44874.5 |
| hypothetical protein | BSEG_00976 | Not Available | Positive | 952395 - 952901 | 19717.7 |
| diaminopimelate decarboxylase | BSEG_00975 | Q8A800 | Negative | 952966 - 954126 | 42735.3 |
| amino acid kinase family | BSEG_00974 | Q9LYU8 | Negative | 954234 - 955553 | 49296.1 |
| abc transporter, atp-binding protein | BSEG_00973 | A5U7B7 | Negative | 955661 - 956416 | 28375.1 |
| phosphoribosyl-atp diphosphatase | BSEG_00972 | Q8A7Z7 | Negative | 956421 - 957032 | 23196.7 |
| imidazoleglycerol phosphate synthase, cyclase subunit | BSEG_00971 | A6L6Z2 | Negative | 957198 - 957953 | 27227.5 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | BSEG_00970 | A6L6Z1 | Negative | 957963 - 958682 | 26581.2 |
| imidazole glycerol phosphate synthase, glutamine amidotransferase subunit | BSEG_00969 | Q64RT0 | Negative | 958724 - 959314 | 22284.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

