Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_00997 | P39803 | Positive | 926987 - 927877 | 32601.4 |
| aspartate ammonia-lyase | BSEG_00996 | P07346 | Positive | 928141 - 929574 | 52180.2 |
| hypothetical protein | BSEG_00995 | Not Available | Negative | 929794 - 930174 | 14324.3 |
| hypothetical protein | BSEG_00994 | Not Available | Negative | 930233 - 931720 | 56388.1 |
| peptidase, s9a/b/c family, catalytic domain protein | BSEG_00993 | Q6F3I7 | Negative | 931897 - 934128 | 84316.5 |
| papain family cysteine protease | BSEG_00992 | Not Available | Negative | 934259 - 935449 | 45264.6 |
| peptidase, c69 family | BSEG_00991 | Q48841 | Negative | 935481 - 937079 | 60197.0 |
| cyclic nucleotide-binding domain protein | BSEG_00990 | Not Available | Positive | 937223 - 937801 | 22568.6 |
| hypothetical protein | BSEG_00989 | Not Available | Negative | 937798 - 939270 | 56298.2 |
| hypothetical protein | BSEG_00988 | Not Available | Negative | 939307 - 940692 | 48607.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

