Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_04578 | Not Available | Positive | 905295 - 905411 | 4456.61 |
| ion channel | BSEG_01015 | Not Available | Positive | 905438 - 906172 | 28242.9 |
| transglutaminase-like protein | BSEG_01014 | Not Available | Positive | 906254 - 908917 | 99132.9 |
| cutc family protein | BSEG_01013 | Q5L9Y1 | Negative | 909009 - 909872 | 31317.4 |
| hypothetical protein | BSEG_04579 | Not Available | Negative | 909877 - 909999 | 4695.69 |
| glutaminase a | BSEG_01012 | A6LA76 | Negative | 910173 - 911135 | 34699.8 |
| glutamate decarboxylase | BSEG_01011 | Q928R9 | Negative | 911201 - 912649 | 54713.8 |
| transporter, major facilitator family protein | BSEG_01010 | Not Available | Positive | 913090 - 914280 | 43316.0 |
| putative membrane protein | BSEG_01009 | Not Available | Positive | 914312 - 915232 | 33670.6 |
| threonine ammonia-lyase | BSEG_01008 | Q74FW6 | Positive | 915413 - 916609 | 42472.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

