Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | BSEG_04350 | Not Available | Negative | 80717 - 83899 | 118413.0 |
| site-specific recombinase, phage integrase family | BSEG_04351 | Not Available | Negative | 84270 - 85451 | 45902.3 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01670 | Not Available | Positive | 85740 - 89105 | 124077.0 |
| hypothetical protein | BSEG_01669 | Not Available | Positive | 89129 - 91441 | 86082.9 |
| polysaccharide deacetylase | BSEG_01668 | Not Available | Positive | 91699 - 92676 | 37263.8 |
| hypothetical protein | BSEG_01667 | Not Available | Positive | 92770 - 94095 | 50009.5 |
| arylsulfatase | BSEG_01666 | P15589 | Positive | 94109 - 95503 | 51688.5 |
| hypothetical protein | BSEG_01665 | Not Available | Positive | 95517 - 98372 | 106436.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 98165 - 99684 | Not Available |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_01664 | Not Available | Positive | 98578 - 101583 | 114595.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

