Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdp-mannose 4,6-dehydratase | BSEG_01065 | Not Available | Positive | 852000 - 853106 | 42207.8 |
| nad dependent epimerase/dehydratase family protein | BSEG_01064 | Q9LMU0 | Positive | 853106 - 854176 | 40216.2 |
| redoxin family protein | BSEG_01063 | Q8KED5 | Negative | 854349 - 854852 | 17929.6 |
| snare-like domain protein | BSEG_01062 | Not Available | Negative | 854921 - 855547 | 22987.3 |
| tetratricopeptide repeat protein | BSEG_01061 | Not Available | Negative | 855555 - 857072 | 59363.1 |
| glutamine--trna ligase | BSEG_01060 | Q7UX42 | Negative | 857083 - 858822 | 66824.9 |
| phosphate binding protein | BSEG_01059 | P39665 | Negative | 858880 - 859698 | 29954.4 |
| phosphate abc transporter, permease protein pstc | BSEG_01058 | P46339 | Positive | 859966 - 861153 | 42966.9 |
| phosphate abc transporter, permease protein psta | BSEG_01057 | P46340 | Positive | 861251 - 862138 | 32190.6 |
| phosphate abc transporter, atp-binding protein | BSEG_01056 | Q8A853 | Positive | 862236 - 862988 | 28226.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

