Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver domain protein | BSEG_01075 | T2KMF4 | Negative | 839187 - 839552 | 14115.5 |
| hydrolase, nudix family | BSEG_01074 | Not Available | Positive | 839843 - 840643 | 31120.8 |
| carbohydrate kinase, fggy family protein | BSEG_01073 | P09099 | Positive | 840818 - 842311 | 53461.6 |
| xylose isomerase | BSEG_01072 | A6L792 | Positive | 842403 - 843719 | 49038.9 |
| polysaccharide biosynthesis/export protein | BSEG_01071 | Q03961 | Positive | 843960 - 846452 | 92327.3 |
| chain length determinant protein | BSEG_01070 | Not Available | Positive | 846460 - 847599 | 41407.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | BSEG_01069 | O27818 | Negative | 847774 - 848343 | 21738.7 |
| glucose-1-phosphate thymidylyltransferase | BSEG_01068 | P55255 | Negative | 848343 - 849230 | 32723.6 |
| undecaprenyl-phosphate glucose phosphotransferase | BSEG_01067 | Not Available | Negative | 849267 - 850670 | 54180.0 |
| putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | BSEG_01066 | P37741 | Positive | 850784 - 851848 | 40477.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

