Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hepn domain protein | BSEG_01126 | Not Available | Positive | 773197 - 773598 | 15246.4 |
| helicase c-terminal domain protein | BSEG_04574 | Not Available | Positive | 773869 - 776220 | 88788.1 |
| Trna-thr | Not Available | Not Available | Positive | 776582 - 776657 | Not Available |
| hypothetical protein | BSEG_01123 | Not Available | Negative | 776682 - 777506 | 31840.3 |
| asparagine synthase (glutamine-hydrolyzing) | BSEG_01121 | P22106 | Negative | 778285 - 779955 | 62933.8 |
| pyridine nucleotide-disulfide oxidoreductase | BSEG_01120 | P9WN18 | Negative | 779972 - 781372 | 51119.6 |
| glutamate synthase | BSEG_01119 | P55037 | Negative | 781353 - 785831 | 164941.0 |
| glutamine-fructose-6-phosphate transaminase (isomerizing) | BSEG_01118 | Q8AAB1 | Positive | 786199 - 788043 | 67703.3 |
| class ii glutamine amidotransferase | BSEG_01117 | Q51342 | Positive | 788212 - 790095 | 71320.9 |
| carbamoyl-phosphate synthase, small subunit | BSEG_01116 | Q1DUF5 | Positive | 790120 - 791196 | 39964.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

