Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial alpha-l-rhamnosidase | BSEG_04238 | Not Available | Negative | 64426 - 66207 | 66620.2 |
| hypothetical protein | BSEG_04237 | Not Available | Negative | 66450 - 66767 | 12135.0 |
| susd family protein | BSEG_04236 | Not Available | Negative | 66858 - 68996 | 79403.8 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_04235 | Not Available | Negative | 69028 - 72180 | 115172.0 |
| hypothetical protein | BSEG_04534 | Not Available | Positive | 72973 - 73185 | 8592.71 |
| hypothetical protein | BSEG_04346 | Not Available | Negative | 73219 - 74022 | 30745.4 |
| susd family protein | BSEG_04347 | Not Available | Negative | 74106 - 75803 | 64251.4 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 76559 - 76665 | Not Available |
| tonb-linked outer membrane protein, susc/raga family | BSEG_04348 | T2KM18 | Negative | 75832 - 78681 | 106828.0 |
| susd family protein | BSEG_04349 | Not Available | Negative | 78722 - 80698 | 75017.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

