Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_01156 | Not Available | Positive | 744746 - 744970 | 8557.1 |
| amp-binding enzyme | BSEG_01155 | A4YDT1 | Positive | 744979 - 746193 | 45909.0 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BSEG_01154 | P50842 | Positive | 746190 - 746912 | 26557.0 |
| hypothetical protein | BSEG_01153 | Not Available | Positive | 746924 - 747958 | 40162.8 |
| polysaccharide deacetylase | BSEG_01152 | Not Available | Positive | 747976 - 748965 | 38072.4 |
| degt/dnrj/eryc1/strs aminotransferase family protein | BSEG_01151 | Q7DBF3 | Positive | 748987 - 750138 | 43195.5 |
| udp-n-acetyl-d-glucosamine 2-epimerase, udp-hydrolysing | BSEG_01150 | Q0P8T0 | Positive | 750135 - 751265 | 42079.5 |
| pyridoxal-dependent decarboxylase, pyridoxal binding domain protein | BSEG_01149 | P23630 | Positive | 751258 - 752427 | 43966.1 |
| atp-grasp domain protein | BSEG_01148 | Not Available | Positive | 752429 - 753397 | 37110.7 |
| n-acetylneuraminate synthase | BSEG_01147 | Q0P8T1 | Positive | 753394 - 754398 | 36966.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

