Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna/rna non-specific endonuclease | BSEG_01165 | Q502K1 | Negative | 735262 - 736119 | 32263.7 |
| alpha-l-fucosidase | BSEG_01164 | Q99LJ1 | Positive | 736244 - 737593 | 51847.5 |
| hypothetical protein | BSEG_01163 | Not Available | Positive | 737612 - 739651 | 79656.2 |
| hypothetical protein | BSEG_01162 | Not Available | Positive | 740317 - 741147 | 31673.1 |
| putative n-acetylmuramoyl-l-alanine amidase | BSEG_01161 | Not Available | Negative | 741213 - 741632 | 15442.6 |
| hypothetical protein | BSEG_04572 | Not Available | Negative | 741629 - 741727 | 3413.4 |
| putative dna-binding protein | BSEG_01160 | Not Available | Negative | 741771 - 742139 | 13680.8 |
| putative dna-binding protein | BSEG_01159 | Not Available | Negative | 742160 - 742660 | 17911.4 |
| hypothetical protein | BSEG_01158 | Not Available | Positive | 742848 - 743282 | 16487.7 |
| polysaccharide biosynthesis protein | BSEG_01157 | Q58461 | Positive | 743519 - 744727 | 45733.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

