Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnase h domain protein, yqgf family | BSEG_01175 | A6L7K0 | Positive | 724414 - 724833 | 15873.5 |
| peptide deformylase | BSEG_01174 | A6L7J9 | Positive | 724857 - 725411 | 21064.7 |
| tetratricopeptide repeat protein | BSEG_01173 | Not Available | Positive | 725485 - 727494 | 77296.4 |
| threonine--trna ligase | BSEG_01172 | A6L7J7 | Positive | 727575 - 729515 | 74203.2 |
| translation initiation factor if-3 | BSEG_01171 | A6L7J6 | Positive | 729631 - 730227 | 22653.5 |
| ribosomal protein l35 | BSEG_01170 | A6L9S4 | Positive | 730299 - 730496 | 7367.31 |
| ribosomal protein l20 | BSEG_01169 | A6L7J5 | Positive | 730608 - 730958 | 13209.4 |
| 4fe-4s binding domain protein | BSEG_01168 | Not Available | Positive | 731425 - 732192 | 28993.9 |
| yceg family protein | BSEG_01167 | P28306 | Negative | 732418 - 733452 | 39516.8 |
| alpha-l-arabinofuranosidase domain protein | BSEG_01166 | Q59219 | Positive | 733651 - 735174 | 57315.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

