Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_04571 | Not Available | Positive | 699385 - 699528 | 5644.01 |
| hypothetical protein | BSEG_01194 | Not Available | Positive | 699776 - 700342 | 20304.0 |
| hypothetical protein | BSEG_01193 | Not Available | Positive | 700353 - 700751 | 14870.3 |
| peptidase, s9a/b/c family, catalytic domain protein | BSEG_01192 | Q9P778 | Positive | 700840 - 703290 | 91165.0 |
| transcriptional regulator, arac family | BSEG_01191 | Not Available | Negative | 703426 - 704271 | 32420.7 |
| efflux transporter, rnd family, mfp subunit | BSEG_01190 | A4WCC0 | Positive | 704394 - 705491 | 40351.5 |
| rnd transporter, hae1/hme family, permease protein | BSEG_01189 | Q668C6 | Positive | 705510 - 708557 | 112545.0 |
| outer membrane efflux protein | BSEG_01188 | Not Available | Positive | 708596 - 709849 | 46921.7 |
| hypothetical protein | BSEG_01187 | Not Available | Positive | 709996 - 711183 | 45196.9 |
| arylsulfatase | BSEG_01186 | Not Available | Positive | 711170 - 712876 | 65006.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

