Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 region 2 | BSEG_01223 | Not Available | Positive | 665315 - 665950 | 24978.3 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_01222 | Not Available | Positive | 666158 - 667240 | 41255.3 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01221 | Not Available | Positive | 667389 - 671126 | 139624.0 |
| susd family protein | BSEG_01220 | Not Available | Positive | 671142 - 672731 | 60862.9 |
| hypothetical protein | BSEG_01219 | Not Available | Positive | 672744 - 673988 | 47251.8 |
| had hydrolase, family ia, variant 3 | BSEG_01218 | P44004 | Negative | 674101 - 674835 | 27061.4 |
| glucose-6-phosphate isomerase | BSEG_01217 | A6L7P7 | Negative | 674987 - 676330 | 48991.8 |
| nad-dependent glycerol-3-phosphate dehydrogenase c-terminal domain protein | BSEG_01216 | Q0AXC3 | Negative | 676344 - 677339 | 37075.1 |
| lysine--trna ligase | BSEG_01215 | A6L7P5 | Negative | 677395 - 679125 | 66389.1 |
| hypothetical protein | BSEG_01214 | Not Available | Negative | 679200 - 679940 | 28133.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

