Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd transporter, hae1/hme family, permease protein | BSEG_01233 | P25197 | Negative | 651238 - 654363 | 115777.0 |
| efflux transporter, rnd family, mfp subunit | BSEG_01232 | Not Available | Negative | 654363 - 655430 | 39184.1 |
| transcriptional regulator, arac family | BSEG_01231 | Not Available | Positive | 655598 - 656476 | 34106.5 |
| tigr02757 family protein | BSEG_01230 | Not Available | Positive | 656542 - 657306 | 29707.6 |
| glucosamine-6-phosphate deaminase-like protein | BSEG_01229 | Q8AB53 | Negative | 657482 - 659470 | 74778.2 |
| glucosamine-6-phosphate deaminase | BSEG_01228 | A6L7Q8 | Negative | 659474 - 660265 | 29031.6 |
| transporter, major facilitator family protein | BSEG_01227 | P0AA81 | Negative | 660312 - 661547 | 44643.4 |
| n-acylglucosamine 2-epimerase | BSEG_01226 | Not Available | Negative | 661566 - 662762 | 46198.0 |
| dihydrodipicolinate synthetase family | BSEG_01225 | Q66H59 | Negative | 662775 - 663689 | 33910.9 |
| rok family protein | BSEG_01224 | Q44406 | Positive | 663968 - 665200 | 45771.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

