Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon tram protein | BSEG_01256 | Not Available | Positive | 632750 - 634168 | 51294.6 |
| conjugative transposon tran protein | BSEG_01255 | Not Available | Positive | 634238 - 635224 | 37287.1 |
| hypothetical protein | BSEG_01254 | Not Available | Positive | 635272 - 635802 | 19422.1 |
| chc2 zinc finger domain protein | BSEG_01253 | Not Available | Positive | 635810 - 636688 | 33005.6 |
| conjugative transposon protein traq family protein | BSEG_01252 | Not Available | Positive | 636707 - 637207 | 19228.8 |
| hypothetical protein | BSEG_01251 | Not Available | Positive | 637204 - 637731 | 20262.9 |
| dna-binding helix-turn-helix protein | BSEG_01250 | Not Available | Positive | 638425 - 638625 | 7581.29 |
| dna (cytosine-5-)-methyltransferase | BSEG_01249 | P25265 | Positive | 638643 - 639713 | 40321.8 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_01248 | Not Available | Positive | 639715 - 641817 | 81143.7 |
| hypothetical protein | BSEG_01247 | Not Available | Positive | 641824 - 642435 | 24204.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

