Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gdsl-like protein | BSEG_01308 | Not Available | Positive | 565847 - 566512 | 25163.9 |
| gdsl-like protein | BSEG_01307 | Not Available | Positive | 566509 - 568572 | 77821.5 |
| glycoside hydrolase, family 2 | BSEG_01306 | A1CGA8 | Positive | 568599 - 571166 | 98573.6 |
| glycosyl hydrolase family 20, catalytic domain protein | BSEG_01305 | Not Available | Positive | 571183 - 573507 | 86808.1 |
| cyclically-permuted mutarotase family protein | BSEG_01304 | A5UFV3 | Positive | 573602 - 574729 | 40373.4 |
| glycosyl hydrolase family 20, catalytic domain protein | BSEG_01303 | Not Available | Positive | 574726 - 576780 | 76927.7 |
| putative alpha-1,2-mannosidase | BSEG_01302 | Not Available | Positive | 576807 - 579059 | 85557.6 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_01301 | Not Available | Positive | 579062 - 581566 | 93769.4 |
| n-acetylglucosamine-6-phosphate deacetylase | BSEG_01300 | Q84F86 | Positive | 581573 - 582904 | 48822.5 |
| response regulator receiver domain protein | BSEG_01299 | P28835 | Negative | 582988 - 583674 | 26305.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

