Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_01317 | P40407 | Negative | 550196 - 551356 | 43515.7 |
| hdig domain protein | BSEG_01316 | Not Available | Positive | 551410 - 551946 | 20374.5 |
| hypothetical protein | BSEG_01315 | Not Available | Positive | 552037 - 554772 | 104048.0 |
| uracil-dna glycosylase | BSEG_01314 | A6L7T5 | Negative | 554862 - 555524 | 24973.6 |
| aspartate--ammonia ligase | BSEG_01313 | Q8A5V7 | Negative | 555640 - 556680 | 39809.3 |
| Trna-arg | Not Available | Not Available | Positive | 556883 - 556957 | Not Available |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01312 | T2KMI3 | Positive | 557265 - 560540 | 121706.0 |
| susd family protein | BSEG_01311 | Not Available | Positive | 560560 - 562062 | 56882.2 |
| bnr/asp-box repeat protein | BSEG_01310 | P31206 | Positive | 562195 - 563835 | 60343.4 |
| glycosyl hydrolase family 20, catalytic domain protein | BSEG_01309 | P49008 | Positive | 563839 - 565845 | 77079.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

