Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase, phage integrase family | BSEG_01328 | Q5HFS5 | Positive | 538707 - 539510 | 31442.2 |
| type i restriction modification dna specificity domain protein | BSEG_04566 | Not Available | Negative | 539541 - 540956 | 54020.2 |
| hypothetical protein | BSEG_01325 | Not Available | Positive | 542461 - 542634 | 6369.91 |
| hypothetical protein | BSEG_04567 | Not Available | Positive | 542709 - 542807 | 3654.19 |
| hypothetical protein | BSEG_01323 | Not Available | Positive | 542838 - 545669 | 98084.0 |
| hypothetical protein | BSEG_01322 | Not Available | Positive | 545782 - 546051 | 10054.3 |
| hypothetical protein | BSEG_01321 | Not Available | Positive | 546089 - 547174 | 41345.3 |
| abc transporter, atp-binding protein | BSEG_01320 | Q0P9C4 | Positive | 547182 - 548834 | 61888.5 |
| hypothetical protein | BSEG_01319 | Not Available | Positive | 548818 - 549732 | 33856.3 |
| peptidase s24-like protein | BSEG_01318 | Not Available | Positive | 549701 - 550168 | 17972.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

