Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_01337 | Not Available | Negative | 529858 - 530256 | 15404.5 |
| giy-yig catalytic domain protein | BSEG_01336 | Not Available | Negative | 530280 - 531107 | 31201.8 |
| dna-binding helix-turn-helix protein | BSEG_01335 | Not Available | Positive | 531231 - 531440 | 8031.9 |
| type iii restriction enzyme, res subunit | BSEG_01334 | Q07736 | Positive | 531531 - 534233 | 102365.0 |
| n-6 dna methylase | BSEG_01333 | Q89Z59 | Positive | 534238 - 535656 | 53110.5 |
| hypothetical protein | BSEG_01332 | Not Available | Positive | 535660 - 536790 | 44048.9 |
| hypothetical protein | BSEG_01331 | P19704 | Positive | 536836 - 537285 | 17103.2 |
| type i restriction modification dna specificity domain protein | BSEG_01330 | Not Available | Positive | 537319 - 538125 | 30621.4 |
| hypothetical protein | BSEG_04565 | Not Available | Negative | 538120 - 538218 | 3638.74 |
| hypothetical protein | BSEG_01329 | P19705 | Negative | 538239 - 538670 | 16070.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

