Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux abc transporter, permease protein | BSEG_04256 | Q3B5J7 | Negative | 34289 - 35545 | 46664.1 |
| abc transporter, atp-binding protein | BSEG_04255 | Q58206 | Negative | 35555 - 36274 | 26742.3 |
| rok family protein | BSEG_04254 | Q9KCZ4 | Positive | 36427 - 37398 | 34285.3 |
| hypothetical protein | BSEG_04253 | Q8P3K1 | Positive | 37398 - 37787 | 15271.5 |
| hypothetical protein | BSEG_04532 | Not Available | Negative | 37873 - 38007 | 5238.5 |
| hypothetical protein | BSEG_04533 | Not Available | Positive | 38023 - 38187 | 6741.46 |
| l-asparaginase | BSEG_04252 | Q7CQV5 | Positive | 38481 - 39467 | 35029.3 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_04251 | Not Available | Negative | 40422 - 43184 | 104171.0 |
| hypothetical protein | BSEG_04250 | Not Available | Negative | 43197 - 44624 | 52330.1 |
| hypothetical protein | BSEG_04249 | Not Available | Negative | 44640 - 45443 | 30968.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

