Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein l9 | BSEG_01364 | A6KWD5 | Positive | 498027 - 498470 | 16173.9 |
| hypothetical protein | BSEG_01362 | Not Available | Negative | 499386 - 499586 | 6693.74 |
| amp-binding enzyme | BSEG_01361 | Q7TYX8 | Negative | 499747 - 501420 | 63335.5 |
| trna methylthiotransferase yqev | BSEG_01360 | P54462 | Positive | 501526 - 502842 | 49273.0 |
| glycosyltransferase, group 2 family protein | BSEG_01359 | Not Available | Positive | 502849 - 503874 | 39396.6 |
| radical sam domain protein | BSEG_01358 | Not Available | Positive | 503961 - 504842 | 33167.0 |
| dihydroneopterin aldolase | BSEG_01357 | Q5HRN9 | Negative | 504990 - 505358 | 13836.7 |
| hypothetical protein | BSEG_01356 | Not Available | Positive | 505520 - 508492 | 110849.0 |
| ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent | BSEG_01355 | P9WH76 | Negative | 508584 - 511130 | 96363.2 |
| nitroreductase family protein | BSEG_01354 | P17117 | Positive | 511474 - 512214 | 28328.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

