Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_01373 | Not Available | Negative | 489643 - 489834 | 7356.48 |
| putative oxygen-independent coproporphyrinogen iii oxidase | BSEG_01372 | P54304 | Negative | 489972 - 491102 | 43356.6 |
| hypothetical protein | BSEG_04563 | Not Available | Negative | 491141 - 491254 | 4392.39 |
| putative translation elongation factor g | BSEG_01371 | Q5SHN5 | Positive | 491287 - 493446 | 80532.6 |
| putative d-tyrosyl-trna(tyr) deacylase | BSEG_01370 | Not Available | Positive | 493679 - 495277 | 60906.9 |
| transcriptional regulatory protein rpry | BSEG_01369 | Not Available | Positive | 495279 - 495977 | 26811.6 |
| hypothetical protein | BSEG_01368 | Not Available | Negative | 496448 - 496630 | 6168.02 |
| transcriptional regulator, marr family | BSEG_01367 | Not Available | Negative | 496739 - 497185 | 17228.0 |
| ribosomal protein s6 | BSEG_01366 | A6KWD7 | Positive | 497395 - 497739 | 13427.3 |
| ribosomal protein s18 | BSEG_01365 | A6KWD6 | Positive | 497742 - 498011 | 10561.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

