Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_01383 | Not Available | Positive | 473542 - 476136 | 99457.9 |
| glycosyl hydrolase family 67 middle domain protein | BSEG_01382 | B3PC73 | Positive | 476133 - 478178 | 77122.2 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_01381 | Not Available | Positive | 478206 - 480143 | 72701.8 |
| hypothetical protein | BSEG_01380 | Not Available | Negative | 480175 - 481206 | 39264.1 |
| tonb-dependent receptor plug domain protein | BSEG_01379 | Not Available | Negative | 481213 - 483888 | 102173.0 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_01378 | Not Available | Negative | 483896 - 484786 | 33758.5 |
| hypothetical protein | BSEG_01377 | Not Available | Negative | 484813 - 485220 | 15515.8 |
| rna polymerase sigma-70 factor | BSEG_01376 | Not Available | Negative | 485276 - 485902 | 24869.6 |
| hypothetical protein | BSEG_01375 | Not Available | Negative | 485955 - 486941 | 38261.2 |
| tonb-dependent receptor plug domain protein | BSEG_01374 | Not Available | Negative | 486948 - 489599 | 100703.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

