Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 16 | BSEG_01393 | Not Available | Positive | 454980 - 455771 | 30536.4 |
| glycoside/pentoside/hexuronide transporter | BSEG_01392 | P31435 | Positive | 456054 - 457592 | 56265.9 |
| glycosyl hydrolase family 10 | BSEG_01391 | P49942 | Positive | 457632 - 458759 | 42183.6 |
| glycosyl hydrolase, family 43 | BSEG_01390 | Not Available | Positive | 458772 - 459743 | 36816.1 |
| glycosyl hydrolase, family 43 | BSEG_01389 | A7LXT8 | Positive | 459931 - 461829 | 71137.4 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_01388 | Not Available | Positive | 461871 - 464942 | 113019.0 |
| susd family protein | BSEG_01387 | Not Available | Positive | 464957 - 466891 | 71559.0 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_01385 | Not Available | Negative | 467518 - 471570 | 154787.0 |
| hypothetical protein | BSEG_04562 | Not Available | Positive | 471808 - 471930 | 4314.69 |
| glycosyl hydrolase, family 43 | BSEG_01384 | T2KN85 | Positive | 471946 - 473529 | 60270.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

