Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 20, catalytic domain protein | BSEG_01442 | Not Available | Negative | 376193 - 378499 | 85927.2 |
| endonuclease/exonuclease/phosphatase family protein | BSEG_01441 | Q9GUC9 | Negative | 378556 - 379587 | 39607.7 |
| excinuclease abc, a subunit | BSEG_01440 | Q8XNI5 | Negative | 379839 - 382640 | 104912.0 |
| hypothetical protein | BSEG_01439 | O35015 | Positive | 382722 - 384221 | 58017.4 |
| glycosyl hydrolase, family 31 | BSEG_01438 | Q9P999 | Negative | 384581 - 387052 | 95523.4 |
| hypothetical protein | BSEG_01437 | Not Available | Negative | 387140 - 389743 | 100436.0 |
| chromate transport protein | BSEG_01436 | Not Available | Negative | 389757 - 390329 | 21097.4 |
| chromate transport protein | BSEG_01435 | O05216 | Negative | 390326 - 390874 | 20470.8 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_01434 | Not Available | Negative | 390879 - 394895 | 154496.0 |
| putative phosphoribosylformylglycinamidine synthase | BSEG_01433 | Q9M8D3 | Negative | 394973 - 398677 | 137078.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

