Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha amylase, catalytic domain protein | BSEG_02879 | Q8A1G0 | Negative | 2775083 - 2776933 | 70753.9 |
| hypothetical protein | BSEG_04491 | Not Available | Positive | 2777031 - 2777180 | 5919.37 |
| hypothetical protein | BSEG_02878 | Not Available | Positive | 2777182 - 2778777 | 62617.9 |
| hypothetical protein | BSEG_04492 | Not Available | Negative | 2778895 - 2779086 | 7588.01 |
| hypothetical protein | BSEG_02877 | Not Available | Negative | 2779335 - 2782046 | 98537.2 |
| transcriptional regulator, arac family | BSEG_02876 | Not Available | Negative | 2782119 - 2782604 | 19011.1 |
| hypothetical protein | BSEG_04493 | Not Available | Positive | 2782957 - 2783100 | 5600.76 |
| transporter, major facilitator family protein | BSEG_02875 | A2X6E6 | Negative | 2783310 - 2784665 | 49078.2 |
| putative 4-alpha-glucanotransferase | BSEG_02874 | Q69Q02 | Negative | 2784739 - 2787417 | 104536.0 |
| hypothetical protein | BSEG_04494 | Not Available | Positive | 2787506 - 2787649 | 5507.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

