Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease hii | BSEG_02898 | A6L046 | Positive | 2743519 - 2744124 | 22884.4 |
| l-fucose:h+ symporter permease | BSEG_02897 | Not Available | Negative | 2744267 - 2745580 | 48513.5 |
| arabinose isomerase | BSEG_02896 | A6L048 | Negative | 2745692 - 2747467 | 65624.0 |
| transcriptional regulator, gntr family | BSEG_02895 | Not Available | Negative | 2747489 - 2748469 | 38083.7 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | BSEG_02894 | A6L050 | Positive | 2748918 - 2750432 | 55836.0 |
| hypothetical protein | BSEG_02893 | Not Available | Positive | 2750535 - 2751116 | 22082.6 |
| hypothetical protein | BSEG_02892 | Not Available | Positive | 2751184 - 2752371 | 44488.8 |
| peptidase, s8/s53 family | BSEG_02891 | I3R794 | Positive | 2752639 - 2754495 | 67245.1 |
| outer membrane insertion signal domain protein | BSEG_02890 | Not Available | Positive | 2754518 - 2755498 | 35199.9 |
| glycosyl hydrolase, family 53 | BSEG_02889 | P48843 | Negative | 2755585 - 2756727 | 43106.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

