Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fes assembly atpase sufc | BSEG_02909 | P48255 | Positive | 2726559 - 2727311 | 27681.6 |
| fes assembly protein sufd | BSEG_02908 | Q55792 | Positive | 2727340 - 2728683 | 50515.4 |
| cysteine desulfurase, sufs subfamily | BSEG_02907 | Q9K7A0 | Positive | 2728690 - 2729904 | 45016.8 |
| putative alpha,alpha-trehalase | BSEG_02906 | P42592 | Negative | 2730662 - 2732596 | 72974.8 |
| beta galactosidase small chain | BSEG_02905 | Not Available | Negative | 2732717 - 2735893 | 121550.0 |
| hypothetical protein | BSEG_02904 | P44201 | Negative | 2735907 - 2736509 | 21649.9 |
| hypothetical protein | BSEG_02903 | Not Available | Negative | 2736506 - 2736787 | 10217.2 |
| susd family protein | BSEG_02902 | T2KN63 | Negative | 2736902 - 2738419 | 57916.4 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_04489 | Not Available | Negative | 2738440 - 2741568 | 116564.0 |
| tetratricopeptide repeat protein | BSEG_02899 | Not Available | Negative | 2741792 - 2743417 | 63042.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

