Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase i | BSEG_02929 | Q87AQ6 | Positive | 2704975 - 2707413 | 91398.3 |
| shikimate kinase | BSEG_02928 | A6L011 | Positive | 2707410 - 2707937 | 20411.6 |
| arginine 2-monooxygenase | BSEG_02927 | A6L012 | Positive | 2707978 - 2709870 | 71492.0 |
| acetylglutamate kinase | BSEG_02926 | A6L013 | Positive | 2709875 - 2710648 | 27055.0 |
| sigma-70 region 2 | BSEG_02925 | Not Available | Positive | 2710711 - 2711220 | 20171.2 |
| hypothetical protein | BSEG_02924 | Not Available | Positive | 2711210 - 2711683 | 18208.8 |
| hypothetical protein | BSEG_02923 | Not Available | Negative | 2711881 - 2712612 | 25907.4 |
| hypothetical protein | BSEG_02922 | Not Available | Positive | 2712719 - 2713423 | 27250.4 |
| gram-positive signal peptide protein, ysirk family | BSEG_02921 | D5EXI2 | Positive | 2713444 - 2714754 | 49253.2 |
| hypothetical protein | BSEG_02920 | Not Available | Positive | 2714859 - 2715509 | 24721.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

