Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid maintenance system killer protein | BSEG_02958 | Not Available | Positive | 2674183 - 2674506 | 12553.1 |
| addiction module antidote protein higa | BSEG_02957 | Not Available | Positive | 2674496 - 2675611 | 43337.5 |
| hypothetical protein | BSEG_04488 | Not Available | Positive | 2675621 - 2675755 | 5341.53 |
| glycosyl hydrolase, family 88 | BSEG_02956 | Not Available | Positive | 2676233 - 2677531 | 49809.6 |
| hypothetical protein | BSEG_02955 | Not Available | Negative | 2677589 - 2678086 | 18591.8 |
| outer membrane insertion signal domain protein | BSEG_02954 | Not Available | Negative | 2678099 - 2678746 | 24406.9 |
| hypothetical protein | BSEG_02953 | Not Available | Positive | 2678926 - 2679174 | 9312.88 |
| hypothetical protein | BSEG_02952 | Not Available | Positive | 2679383 - 2679601 | 7992.84 |
| thioredoxin | BSEG_02951 | Not Available | Positive | 2679604 - 2680083 | 17834.7 |
| transcriptional regulator, marr family | BSEG_02950 | Not Available | Positive | 2680122 - 2680469 | 13230.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

