Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | BSEG_03013 | O31834 | Negative | 2611745 - 2611957 | 7848.66 |
| hypothetical protein | BSEG_04483 | Not Available | Negative | 2611961 - 2612218 | 10043.2 |
| hypothetical protein | BSEG_03012 | Not Available | Negative | 2612231 - 2612866 | 23632.2 |
| hypothetical protein | BSEG_03011 | Not Available | Negative | 2612879 - 2613526 | 23491.1 |
| caax amino terminal protease family protein | BSEG_03010 | Not Available | Negative | 2613542 - 2614369 | 30621.4 |
| peptidase, s9a/b/c family, catalytic domain protein | BSEG_03009 | V5YMB3 | Negative | 2614460 - 2616355 | 71521.1 |
| hypothetical protein | BSEG_03007 | Not Available | Negative | 2616795 - 2617094 | 11281.5 |
| hypothetical protein | BSEG_04484 | Not Available | Positive | 2617270 - 2617407 | 5465.71 |
| riboflavin biosynthesis protein ribf | BSEG_03006 | P73651 | Negative | 2617391 - 2618311 | 35194.3 |
| had hydrolase, family ia, variant 3 | BSEG_03005 | Q8A947 | Negative | 2618311 - 2618925 | 24017.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

