Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | BSEG_03528 | Not Available | Positive | 2539182 - 2540606 | 55138.4 |
| signal peptidase i | BSEG_03529 | Not Available | Positive | 2540644 - 2541507 | 32884.7 |
| wbqc-like protein | BSEG_03530 | Not Available | Positive | 2541507 - 2542163 | 25587.3 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | BSEG_03531 | O34896 | Positive | 2542168 - 2542980 | 28669.7 |
| mannonate dehydratase | BSEG_03532 | Q8A7U2 | Positive | 2543020 - 2544195 | 44558.7 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03533 | Not Available | Positive | 2544411 - 2547632 | 118795.0 |
| susd family protein | BSEG_03534 | Not Available | Positive | 2547637 - 2549499 | 70120.8 |
| arylsulfatase | BSEG_03535 | Not Available | Positive | 2549523 - 2551097 | 61151.8 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_04473 | Not Available | Negative | 2551148 - 2555041 | 148801.0 |
| hypothetical protein | BSEG_03538 | Not Available | Negative | 2555249 - 2557705 | 92203.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

