Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase cytochrome b subunit, b558 family | BSEG_03508 | Not Available | Positive | 2514965 - 2515651 | 25501.5 |
| succinate dehydrogenase flavoprotein subunit | BSEG_03509 | P08065 | Positive | 2515686 - 2517644 | 72610.4 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | BSEG_03510 | Not Available | Positive | 2517665 - 2518420 | 27278.1 |
| transcriptional regulator, arac family | BSEG_03511 | Not Available | Negative | 2518417 - 2519331 | 35333.4 |
| hypothetical protein | BSEG_04471 | Not Available | Positive | 2520370 - 2520603 | 8347.52 |
| hypothetical protein | BSEG_03513 | Not Available | Negative | 2520492 - 2521481 | 35834.4 |
| hypothetical protein | BSEG_03514 | A7LXW1 | Negative | 2521530 - 2522531 | 36545.3 |
| hypothetical protein | BSEG_03515 | Not Available | Negative | 2522498 - 2523865 | 52220.6 |
| hypothetical protein | BSEG_04472 | Not Available | Negative | 2523875 - 2524255 | 15501.9 |
| f5/8 type c domain protein | BSEG_03517 | Not Available | Positive | 2524471 - 2526354 | 70750.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

