Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heavy metal efflux pump, czca family | BSEG_03488 | P94177 | Positive | 2487279 - 2490404 | 115188.0 |
| transcriptional activator protein copr | BSEG_03489 | Q02540 | Positive | 2490444 - 2491118 | 25755.4 |
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_03490 | Q49XM6 | Positive | 2491163 - 2492515 | 51795.6 |
| transporter gate domain protein | BSEG_03491 | P35158 | Negative | 2492501 - 2493733 | 44232.3 |
| dna-damage-inducible protein d | BSEG_03492 | Not Available | Positive | 2494339 - 2494974 | 23798.6 |
| hypothetical protein | BSEG_03493 | Not Available | Negative | 2495096 - 2495893 | 29163.1 |
| hypothetical protein | BSEG_03494 | Not Available | Negative | 2495896 - 2496915 | 38879.8 |
| site-specific recombinase, phage integrase family | BSEG_03495 | Not Available | Positive | 2497015 - 2498061 | 40420.1 |
| transcriptional regulator, arac family | BSEG_03496 | Not Available | Positive | 2498870 - 2499364 | 19218.4 |
| hypothetical protein | BSEG_03497 | Not Available | Positive | 2499409 - 2502342 | 106950.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

