Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mazg nucleotide pyrophosphohydrolase domain protein | BSEG_03478 | P42979 | Negative | 2476108 - 2476428 | 12299.6 |
| d-tyrosyl-trna(tyr) deacylase | BSEG_03479 | A6KZN7 | Negative | 2476428 - 2476880 | 16634.2 |
| excinuclease abc, c subunit | BSEG_03480 | Q8A2N9 | Negative | 2477037 - 2478857 | 69869.8 |
| adenine phosphoribosyltransferase | BSEG_03481 | A6KZN9 | Negative | 2479211 - 2479735 | 19108.4 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | BSEG_03482 | A6KZP0 | Negative | 2479795 - 2481666 | 69629.1 |
| spfh/band 7/phb domain protein | BSEG_03483 | Not Available | Negative | 2481813 - 2483513 | 62531.3 |
| hypothetical protein | BSEG_03484 | Not Available | Negative | 2483539 - 2484072 | 20202.4 |
| translation metalloprotein ybey | BSEG_03485 | A6KZP3 | Negative | 2484307 - 2484723 | 15867.9 |
| outer membrane efflux protein | BSEG_03486 | Not Available | Positive | 2484894 - 2486147 | 48055.2 |
| efflux transporter, rnd family, mfp subunit | BSEG_03487 | Not Available | Positive | 2486172 - 2487269 | 40732.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

