Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BSEG_03411 | P94357 | Negative | 2380724 - 2381620 | 33128.3 |
| leucine--trna ligase | BSEG_03412 | A6KZH6 | Negative | 2381703 - 2384537 | 108420.0 |
| response regulator receiver domain protein | BSEG_03413 | Not Available | Positive | 2384934 - 2388917 | 152596.0 |
| glycosyl hydrolase family 2, sugar binding domain protein | BSEG_03414 | Not Available | Positive | 2389060 - 2391498 | 92850.0 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03415 | Not Available | Positive | 2391532 - 2394585 | 114120.0 |
| susd family protein | BSEG_03416 | Not Available | Positive | 2394600 - 2396381 | 68801.7 |
| wd40-like protein | BSEG_03417 | Q97A95 | Negative | 2396444 - 2399668 | 120831.0 |
| rna polymerase sigma-70 factor | BSEG_03418 | Not Available | Positive | 2399847 - 2400434 | 22777.2 |
| sigma factor regulatory protein, fecr/pupr family | BSEG_03419 | Not Available | Positive | 2400523 - 2401533 | 38688.5 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_03420 | Not Available | Positive | 2401598 - 2405125 | 131548.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

