Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase/histidine kinase/dna gyrase b/hsp90 domain protein | BSEG_03402 | Q45614 | Positive | 2371282 - 2372595 | 50023.3 |
| putative transcriptional regulatory protein rpry | BSEG_03403 | Not Available | Positive | 2372592 - 2373290 | 26760.4 |
| radical sam domain protein | BSEG_03404 | C0QX49 | Negative | 2373362 - 2374138 | 29199.2 |
| hypothetical protein | BSEG_03405 | Not Available | Negative | 2374184 - 2376256 | 81316.2 |
| hypothetical protein | BSEG_03406 | Not Available | Positive | 2376419 - 2376925 | 19618.1 |
| rna methyltransferase, trmh family | BSEG_03407 | O51468 | Negative | 2376956 - 2377492 | 19975.2 |
| quinolinate synthetase complex, a subunit | BSEG_03408 | B3QS01 | Positive | 2378075 - 2379067 | 36614.1 |
| hypothetical protein | BSEG_04466 | Not Available | Positive | 2379064 - 2379207 | 5581.18 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | BSEG_03409 | Q8A327 | Negative | 2379351 - 2379932 | 21253.5 |
| putative toxin-antitoxin system, toxin component, gnat family | BSEG_03410 | Not Available | Positive | 2380092 - 2380619 | 20768.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

