Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | BSEG_02194 | Not Available | Negative | 2319130 - 2322465 | 122692.0 |
| hypothetical protein | BSEG_04452 | Not Available | Negative | 2322551 - 2322727 | 6922.42 |
| peptidase, s9a/b/c family, catalytic domain protein | BSEG_02195 | Not Available | Negative | 2322996 - 2325239 | 85728.9 |
| f5/8 type c domain protein | BSEG_02196 | Not Available | Negative | 2325251 - 2327656 | 89728.0 |
| f5/8 type c domain protein | BSEG_02197 | P48791 | Negative | 2327727 - 2330129 | 90106.0 |
| hypothetical protein | BSEG_02198 | Not Available | Negative | 2330166 - 2332889 | 103259.0 |
| hypothetical protein | BSEG_02199 | Not Available | Negative | 2333062 - 2334390 | 51185.6 |
| susd family protein | BSEG_02200 | Not Available | Negative | 2334461 - 2336245 | 68310.4 |
| tonb-linked outer membrane protein, susc/raga family | BSEG_02201 | Not Available | Negative | 2336271 - 2339396 | 115041.0 |
| hypothetical protein | BSEG_04453 | Not Available | Negative | 2339720 - 2339905 | 6839.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

