Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | 5_1_36/D4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1590637 bp
Thymine Count
1633510 bp
Guanine Count
1190690 bp
Cytosine Count
1119911 bp
Genome Length
5534748 bp
Protein-coding Genes
4422 genes
Non-Coding Genes
79 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | BSEG_02183 | P24228 | Negative | 2304804 - 2306204 | 52376.7 |
| dihydrolipoyl dehydrogenase | BSEG_02184 | P75393 | Negative | 2306204 - 2307544 | 47707.8 |
| hypothetical protein | BSEG_02185 | Not Available | Negative | 2307560 - 2307973 | 15686.4 |
| hypothetical protein | BSEG_02186 | Not Available | Negative | 2307977 - 2308387 | 15464.6 |
| hypothetical protein | BSEG_02187 | Not Available | Negative | 2308463 - 2309023 | 21549.0 |
| l-aspartate oxidase | BSEG_02188 | Q51363 | Positive | 2309179 - 2310834 | 61943.5 |
| hypothetical protein | BSEG_02189 | Not Available | Negative | 2310952 - 2312439 | 56163.5 |
| pectate lyase | BSEG_02190 | Not Available | Negative | 2312339 - 2314480 | 81666.2 |
| hypothetical protein | BSEG_02192 | Not Available | Negative | 2314749 - 2317058 | 86340.0 |
| susd family protein | BSEG_02193 | Not Available | Negative | 2317078 - 2319117 | 76726.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

